create.dt - convert a Seurat or SingleCellExperiment to a data.table — create.dt • Spectre

This function converts a Seurat or SingleCellExperiment object into a list containing a data.table, with vectors of gene and dimensionality reduction

Usage

create.dt(dat, from)

Arguments

dat: NO DEFAULT. A Seurat or SingleCellExperiment object.
from: DEFAULT = NULL. By default, the class of object will be detected automatically, but this can be overwritten using from. Can be from = 'Seurat' or 'SingleCellExperiment'.

References

https://github.com/ImmuneDynamics/Spectre.

Author

Thomas M Ashhurst, thomas.ashhurst@sydney.edu.au