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write.hdf5

Source: R/write.hdf5.R
write.hdf5.Rd

write.hdf5

Usage

write.hdf5(
  dat,
  channels = NULL,
  merge.channels = NULL,
  q.max = 0.99,
  flip.y = TRUE,
  random.crop.x = NULL,
  random.crop.y = NULL,
  random.crop.x.seed = 42,
  random.crop.y.seed = 21,
  crop.coordinates = NULL,
  print.spatial.plot = TRUE,
  chunk.size = NULL,
  compression = 0,
  plots = FALSE
)

Arguments

dat

NO DEFAULT. Spatial data list

channels

DEFAULT = NULL. Channels to include. If NULL, all channels included.

merge.channels

DEFAULT = NULL. Channels to use to create an additional 'merged' channel.

q.max

DEFAULT = 0.99

flip.y

DEFAULT = TRUE

random.crop.x

DEFAULT = NULL

random.crop.y

DEFAULT = NULL

random.crop.x.seed

DEFAULT = 42

random.crop.y.seed

DEFAULT = 21

print.spatial.plot

DEFAULT = TRUE

chunk.size

DEFAULT = NULL

compression

DEFAULT = 0

plots

DEFAULT = FALSE

References

https://github.com/ImmuneDynamics/Spectre.

Author

Thomas M Ashhurst, thomas.ashhurst@sydney.edu.au